Kishori M Konwar
        
HOME RESEARCH SOFTWARE RECOGNITIONS

PEER REVIEWED PUBLICATIONS

Bioinformatics and Computational Biology.
  1. K.M. Konwar, I.I. Mandoiu, A.C. Russell and A.A. Shvartsman, “Improved Algorithms for Multiplex PCR Primer Set Selection with Amplification Length Constraints”, Proc. 3rd Asia-Pacific Bioinformatics Conference (APBC) , pp. 41-50 (2005).  PDF

  2.  B. DasGupta, K.M. Konwar, I.I. Mandoiu and A.A. Shvartsman, “Highly scalable algorithms for robust string barcoding”, Proc. 5th International Conference on Computational Science, part II , pp 1020-1028 (2005). PDF

  3. B. DasGupta, K.M. Konwar, I.I. Mandoiu and A.A. Shvartsman, “Highly scalable algorithms for robust string barcoding”, International Journal of Bioinformatics Research and Applications 1, pp. 145-161 (2005). PDF

  4.  B. DasGupta, K.M. Konwar, I.I. Mandoiu and A.A. Shvartsman, “DNA-BAR: Distinguisher Selection for DNA Barcoding”, Bioinformatics, 21(16), pp. 3424-3426 (2005). PDF

  5.  K.M. Konwar, I.I. Mandoiu, A.C. Russell and A.A. Shvartsman, “Improved Algorithms for Multiplex PCR Primer Set Selection with Amplification Length Constraints”, Bioinformatics Algorithms: Techniques and Applications, Wiley, pp. 241-258  (2008). PDF

  6. Kaston Leung, Hans Zahn, Timothy Leaver, Kishori M. Konwar, Niels W. Hanson, Antoine P. Pagé, Chien-Chi Log, Patrick S. Chain, Steven J. Hallam and Carl L. Hansen, “A programmable droplet-based microfluidic device applied to multiparameter analysis of single microbes and microbial communities”, Proceddings of the  Natlional Academy  Sciences (PNAS),109:18505-18510 (2012). PDF

  7. E. Allers E, J.J.Wright, K.M.Konwar, C.G.Howes, E.Beneze, S.J.Hallam and M.B. Sullivan, “Diversity and population structure of Marine Group A bacteria in the Northeast subarctic Pacific Ocean”, ISME Journal (2012). PDF

  8. Jody J. Wright, Kishori M. Konwar and Steven J. Hallam, “Microbial ecology of expanding oxygen minimum zones”, Nature Reviews Microbiology 10, 381-394 (June 2012). PDF

  9. W Evan Durno, Niels W Hanson,  Kishori M Konwar and Steven J Hallam, “Expanding the boundaries of local similarity analysis, BMC Genomics, 14(Suppl 1):S3 (2013). PDF

  10. Kishori M Konwar, Niels W Hanson,  Antoine P Page and Steven J Hallam, “MetaPathways: a modular pipeline for constructing pathway/genome databases from environmental sequence information , BMC Bioinformatics, 14:202 (2013). PDF
Distributed Algorithms
  1. K.M. Konwar, D.R. Kowalski and A.A. Shvartsman, “The Join Problem in Dynamic Network Algorithms”, Proceedings of the  International Conference Dependable Systems Networks (DSN), pp 315-324 (2004). PDF

  2. K.M. Konwar, D.R. Kowalski and A.A. Shvartsman, “Node Discovery in Networks”, Proceedings of the 9th International Conference On Principles Of Distributed Systems (OPODIS), pages 154–165, (2005). PDF

  3. K.M. Konwar and A.A. Shvartsman, “Resource Discovery in Networks under Bandwidth Limitations”, Proceedings of the 5th International Symposium on Parallel and Distributed Computing (ISPDC), pp 42-49. (2006). PDF

  4. K.M.Konwar, S. Rajasekaran, A. A. Shvartsman, “Robust Network Supercomputing with Malicious Processes”, The International Symp on Distributed Computing (DISC) pp 474-488 (2006) PDF

  5. K.M. Konwar, P.M. Musial, N.C. Nicolaou and A.A. Shvartsman, “Implementing Indirect Atomic Data through Indirect Learning in Dynamic  Networks”, Network Computing Applications (NCA 07) pp 223-230 (2007) . PDF

  6. Kishori M. Konwar, Peter M. Musial, Alexander A. Shvartsman, Spontaneous, Self-Sampling Quorum Systems for Ad Hoc Networks, Proceedings of the 7th International Symposium on Parallel and Distributed Computing (ISPDC) pp 367-374 (2008).  PDF

  7. Kishori M. Konwar, Dariusz R. Kowalski, Alexander A. Shvartsman, Node discovery in networks", J. Parallel Distrib. Comput. 69(4): 337-348 (2009) PDF

  8. Seda Davtyan, Kishori M. Konwar, Alexander A. Shvartsman, Robust network supercomputing without centralized control”, Proceddings of the ACM Symposium on Principles of Distributed Computing (PODC) pp 293-294 (2011). PDF

  9. Seda Davtyan, Kishori M. Konwar, Alexander A. Shvartsman, Robust network supercomputing without centralized control”, Proceedings of the 9th International Conference On Principles Of Distributed Systems (OPODIS) pp 435-450 (2011). PDF

  10. Seda Davtyan, Kishori M. Konwar, Alexander A. Shvartsman, Decentralized network supercomputing in the presence of malicious and crash-prone workers”, Proceddings of the ACM Symposium on Principles of Distributed Computing (PODC) pp 231-232 (2012). PDF

  11. Seda Davtyan, Kishori M. Konwar, Alexander Russell, Alexander A. Shvartsman, Dealing with Undependable Workers in Decentralized Network Supercomputing”, Proceedings ot the 14th International Conference on Distributed Computing and Networking (ICDCN) pp 27-41(2013).PDF

  12. Seda Davtyan, Kishori Konwar and Alexander Shvartsman, “Estimating Reliability of Workers for Cooperative Distributed Computing”, Proceedings of the 5th International Symposium on Parallel and Distributed Computing (ISPDC) 2013. (to appear) PDF

  13. Seda Davtyan, Kishori Konwar and Alexander Shvartsman, Self-Stabilizing Resource Discovery Algorithm”,  Proceedings of the ACM Symposium on Principles of Distributed Computing (PODC) (2013) (to appear)

  14. Seda Davtyan, Kishori Konwar and Alexander Shvartsman,  Self-Stabilizing Resource Discovery Algorithm”,  Proceedings of the International Conference On Principles of Distributed Systems (OPODIS) (2013) (accepted)

  15. Inna Rytsareva, Ananth Kalyanaraman, Kishori Konwar and Steven J Hallam,   Scalable Heuristics for Cluster Biological Graphs ”,  Proceedings of the IEEE International Conference on Computational Advances in Bio and Medical Sciences (ICCABS) New Orleans, LA, June 12-14, 2013
Statistical and Computational Algorithms
  1. S. Mitra, K.M. Konwar and S.K. Pal, “Fuzzy decision tree, linguistic rules and fuzzy knowledge-based network: generation and evaluation”. IEEE Transactions on Systems, Man, and Cybernetics, Part C 32(4): 328-339 (2002). PDF

  2. Chunming Li, Chenyang Xu, Kishori M. Konwar, Martin D Fox, Fast Distance Preserving Level Set Evolution for Medical Image Segmentation, Proceedings of The 9th International Conference on Control, Automation, Robotics and Vision (ICARCV)  pp 1-7 (2006). PDF

  3. Kishori M. Konwar, Lester Lipsky, Marwan S. Sleiman, Moments of Memory Access Time for Systems With Hierarchical Memories. Computers and Their Applications pp 103-109 (2006). PDF

  4. Marwan S. Sleiman, Lester Lipsky, Kishori M. Konwar, Performance modeling of hierarchical memories, Proceedings of the ISCA 19th International Conference on Computer Applications in Industry and Engineering (CAINE) pp 54-59 (2006).PDF

  5. E.A. Alvarez, F. J. Ciocchini and K.M. Konwar, “A Stationary Markov Chain Model for Labor Dynamics”,  Journal of Data Science 7 pp 27-42 (2008).  PDF ;

  6. Navanath Saharia and Kishori M Konwar, “LuitPad: A fully Unicode compatible Assamese writing”, Proceedings of the Second Workshop on Advances in Text Input Methods (WTIM 2), pp 79-88 (2012). PDF

  7. Navanath Saharia, Kishori M. Konwar, Utpal Sharma, Jugal K. Kalita, An Improved Stemming Approach Using HMM for a Highly Inflectional Language, Proceedings of 14th International Conference on Intelligent Text Processing and Computational Linguistics ( CICLing) (1) pp164-173 (2013). PDF
NOT PEER REVIEWED
  1. K.M. Konwar, I.I. Mandoiu, A.C. Russell and A.A. ShvartsmanApproximation algorithms for minimum PCR primer set selection with amplification length and uniqueness constraints, ACM Computing Research Repository, cs.DS/0406053 (2004). PDF
UNDER SUBMISSION OR NEAR COMPLETION
  1. K.M. Konwar and A.A. Shvartsman, “Reliably Executing Tasks After Estimating the Number of Malicious Processors” 
  2. K.M. Konwar and A.A. Shvartsman, “Node Discovery in Networks in the Presence of Joins and Failure” 
  3. Kishori M. Konwar, Peter M. Musial, Nicolas C. Nicolaou and Alex A. Shvartsman,  Implementing Atomic Data through Indirect Learning in Dynamic Networks,
  4. Seda Davtyan, Kishori M. Konwar, Alexander Russell, Alexander A. Shvartsman: Dealing with Undependable Workers in Decentralized Network Supercomputing.
  5. Kishori M. Konwar, Niels W. Hanson, Antoine P. Pagé and Steven J. Hallam, MetaPathways: A modular pipeline for constructing Pathway/Genome Databases from environmental sequence information.
  6. Navanath Saharia and Kishori M Konwar, "Text Summarization Using Integer Optimization and Greedy Methods"
  7. Hierarchical and High-Performance clustering and large  scale protein sequence annotation
  8. Kishori M. Konwar, Lester Lipsky, Marwan S. Sleiman, Analysis of Moments of Memory Access Time for Systems With Hierarchical Memories.